Membrane traffic at synapses (MemTraS)


Vesicular trafficking is one of the most salient features of synaptic physiology. In the tiny (~1 µm wide) chemical synapses, presynaptic vesicles concentrate and release neurotransmitter molecules which bind to post-synaptic receptors. The exocytosis and recycling of synaptic vesicles is a very prominent and essential feature of neuronal physiology that is highly controlled in time and space. Moreover, post-synaptic membrane trafficking, although not as prominent quantitatively, is pivotal for the maintenance of signal transduction complexes supporting synaptic transmission and plasticity. Most of our knowledge about synapse physiology comes from studying glutamatergic synapses which represent the majority of synapses in the brain. Nevertheless, other types of synapses, such as neuromodulatory dopaminergic synapses, could have a very different molecular composition and operate in a different way. However, because they represent a small minority of synapses formed from a very small number of neurons, their analysis has been difficult through classical cellular and molecular methods.

Our goal in the team is to use the most advanced fluorescence imaging techniques together with refined purification of synaptic elements (synaptosomes) to address the mechanisms regulating synapse function through membrane trafficking events in neuronal pre- and post-synaptic compartments. We want to decipher these mechanisms in the normal brain or in the course of disease. To achieve this goal, we use, on top of the standard techniques of the modern neuroscience lab (molecular biology, biochemistry, imaging, electrophysiology), two unique expertise developed by the two PIs: first, with David Perrais, we develop methods to detect individual exocytosis and endocytosis events and perform quantitative imaging. Second, with Etienne Herzog, we purify synaptosomes from adult animals with fluorescence activated synaptosome sorting (FASS), which enables powerful proteomics, transcriptomics and functional approaches. In addition, we have developed, in the last years, fruitful collaborations to analyze the fine structural elements of diverse synapses, in particular neuromodulatory synapses with cryo-correlative light and electron microscopy (cryoCLEM). Cryo-CLEM combined to in-vitro and ex-vivo models of synapses will provide major new insights into the cellular and molecular mechanisms of neurotransmission and neuromodulation.

Altogether, we aim at identifying new pathways in specific synapses and test their relevance for synaptic nanostructure and function in the normal and diseased brain.

Techniques

  1. TIRF microscopy
  2. Exo-endocytosis assays
  3. Fluorescence activated synaptosome sorting
  4. Proteomics

Keywords

  • Synapse
  • Endocytosis
  • Synaptosome
  • Neuromodulation
  • Dopamine
  • Synucleinopathy
  • Synucleinopathy

Selected publications

Hyaluronic acid-based hydrogels with tunable mechanics improved structural and contractile properties of cells
Šimon Klimovič, Deborah Beckerová, Jakub Věžník, Daniil Kabanov, Karel Lacina, Sarka Jelinkova, Jaromír Gumulec, Vladimír Rotrekl, Jan Přibyl
Biomaterials Advances. 2024-05-01

10.1016/j.bioadv.2024.213819

Rational Engineering of an Improved Genetically Encoded pH Sensor Based on Superecliptic pHluorin
Yi Shen, Yurong Wen, Silvia Sposini, Anjali Amrapali Vishwanath, Ahmed S. Abdelfattah, Eric R. Schreiter, M. Joanne Lemieux, Jaime de Juan-Sanz, David Perrais, Robert E. Campbell
ACS Sens.. 2023-07-23

10.1021/acssensors.3c00484

Endocytosis in the axon initial segment maintains neuronal polarity
Kelsie Eichel, Takeshi Uenaka, Vivek Belapurkar, Rui Lu, Shouqiang Cheng, Joseph S. Pak, Caitlin A. Taylor, Thomas C. Südhof, Robert Malenka, Marius Wernig, Engin Özkan, David Perrais & Kang Shen
Nature. 2022-08-17

10.1038/s41586-022-05074-5

A synaptomic analysis reveals dopamine hub synapses in the mouse striatum
Vincent Paget-Blanc, Marlene E. Pfeffer, Marie Pronot, Paul Lapios, Maria-Florencia Angelo, Roman Walle, Fabrice P. Cordelières, Florian Levet, Stéphane Claverol, Sabrina Lacomme, Mélina Petrel, Christelle Martin, Vincent Pitard, Véronique De Smedt Peyrusse, Thomas Biederer, David Perrais, Pierre Trifilieff, Etienne Herzog
Nat Commun. 2022-06-03

10.1038/s41467-022-30776-9

Subcellular and regional localization of mRNA translation in midbrain dopamine neurons
Benjamin D. Hobson, Linghao Kong, Maria Florencia Angelo, Ori J. Lieberman, Eugene V. Mosharov, Etienne Herzog, David Sulzer, Peter A. Sims
Cell Reports. 2022-01-01

10.1016/j.celrep.2021.110208

The vSNAREs VAMP2 and VAMP4 control recycling and intracellular sorting of post-synaptic receptors in neuronal dendrites
May Bakr, Damien Jullié, Julia Krapivkina, Vincent Paget-Blanc, Lou Bouit, Jennifer D. Petersen, Natacha Retailleau, Christelle Breillat, Etienne Herzog, Daniel Choquet, David Perrais
Cell Reports. 2021-09-01

10.1016/j.celrep.2021.109678